Gene: Sopen05g004950

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g004950
  • Transcript Identifier Sopen05g004950.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 3634072-3635325 : negative

Gene Family Information

  • ID HOM05D000293
  • #Genes/#Species 1516/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g004950.1

Descriptions

  • Description putative transcription factor: R2R3-MYB transcription family. Involved in regulation of phosphate starvation responses and gibberellic acid biosynthesis. | myb domain protein 62 (MYB62) | CONTAINS InterPro DOMAIN/s: SANT, DNA-binding , Homeodomain-like , Myb, DNA-binding , HTH transcriptional regulator, Myb-type, DNA-binding , Homeodomain-related , Myb transcription factor | BEST Arabidopsis thaliana protein match is: myb domain protein 116
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0055062
ISO
PLAZA Integrative Orthologyphosphate ion homeostasis AT1G68320
GO:0010373
ISO
PLAZA Integrative Orthologynegative regulation of gibberellin biosynthetic process AT1G68320
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT1G68320
GO:0009686
ISO
PLAZA Integrative Orthologygibberellin biosynthetic process AT1G68320
GO:0016036
ISO
PLAZA Integrative Orthologycellular response to phosphate starvation AT1G68320
GO:0010015
ISO
PLAZA Integrative Orthologyroot morphogenesis AT1G68320

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0043565
IEA
InterProsequence-specific DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G68320

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001005 SANT/Myb domain
IPR017930 Myb domain
IPR044676 MYB-like transcription factor EOBI/EOBII-like, plant
IPR009057 Homeobox-like domain superfamily
Mapman id Description
15.5.2.1 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)