Gene: Sopen05g003540

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g003540
  • Transcript Identifier Sopen05g003540.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 2363427-2366981 : negative

Gene Family Information

  • ID HOM05D000618
  • #Genes/#Species 925/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g003540.1

Descriptions

  • Description RING/FYVE/PHD zinc finger superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 , Zinc finger, C3HC4 RING-type , Zinc finger, RING-CH-type | BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
ISO
PLAZA Integrative Orthologyprotein ubiquitination AT1G14260

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT1G14260

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011016 Zinc finger, RING-CH-type
IPR033275 E3 ubiquitin-protein ligase MARCH-like
IPR022143 Protein of unknown function DUF3675
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.3.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-v-class E3 ligase