Gene: Sopen05g003140

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g003140
  • Transcript Identifier Sopen05g003140.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 1994022-1996164 : positive

Gene Family Information

  • ID HOM05D000183
  • #Genes/#Species 2094/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g003140.1

Descriptions

  • Description Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. | ATHB13 | FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: cotyledon morphogenesis, regulation of transcription, DNA-dependent, response to sucrose stimulus, leaf morphogenesis | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Homeobox, conserved site , Homeobox , Homeodomain-like , Helix-turn-helix motif, lambda-like repressor , Leucine zipper, homeobox-associated , Homeodomain-related | BEST Arabidopsis thaliana protein match is: homeobox protein 23
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009739
ISO
PLAZA Integrative Orthologyresponse to gibberellin AT1G26960
GO:0080022
ISO
PLAZA Integrative Orthologyprimary root development AT1G69780
GO:0022622
ISO
PLAZA Integrative Orthologyroot system development AT1G26960
GO:0048826
ISO
PLAZA Integrative Orthologycotyledon morphogenesis AT1G69780
GO:0009965
ISO
PLAZA Integrative Orthologyleaf morphogenesis AT1G69780
GO:0048527
ISO
PLAZA Integrative Orthologylateral root development AT1G26960
GO:0010311
ISO
PLAZA Integrative Orthologylateral root formation AT1G26960
GO:0009744
ISO
PLAZA Integrative Orthologyresponse to sucrose AT1G69780
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT3G01220

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G01220
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G26960

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003106 Leucine zipper, homeobox-associated
IPR001356 Homeobox domain
IPR009057 Homeobox-like domain superfamily
IPR000047 Helix-turn-helix motif
Mapman id Description
15.5.3.1 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP I/II)