Gene: Sopen04g032190

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g032190
  • Transcript Identifier Sopen04g032190.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 73763688-73773009 : negative

Gene Family Information

  • ID HOM05D000108
  • #Genes/#Species 3077/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g032190.1

Descriptions

  • Description encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers. | FRAGILE FIBER 1 (FRA1) | CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site , Kinesin, motor domain | BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009937
ISO
PLAZA Integrative Orthologyregulation of gibberellic acid mediated signaling pathway Os09g0114500
GO:0010215
ISO
PLAZA Integrative Orthologycellulose microfibril organization AT5G47820
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated Os09g0114500
GO:0030705
ISO
PLAZA Integrative Orthologycytoskeleton-dependent intracellular transport AT5G47820
GO:0009832
ISO
PLAZA Integrative Orthologyplant-type cell wall biogenesis AT5G47820
GO:0042127
ISO
PLAZA Integrative Orthologyregulation of cell population proliferation Os09g0114500
GO:0007018
IEA
InterPromicrotubule-based movement

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G47820
GO:0003777
ISO
PLAZA Integrative Orthologymicrotubule motor activity AT5G47820
GO:0005524
IEA
InterProATP binding
GO:0008574
ISO
PLAZA Integrative Orthologyplus-end-directed microtubule motor activity AT5G47820
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding Os09g0114500
GO:0008017
IEA
InterPromicrotubule binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055028
ISO
PLAZA Integrative Orthologycortical microtubule AT5G47820
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G47820
GO:0005856
ISO
PLAZA Integrative Orthologycytoskeleton Os09g0114500
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Os09g0114500

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036961 Kinesin motor domain superfamily
IPR001752 Kinesin motor domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
20.1.3.3 Cytoskeleton organisation.microtubular network.Kinesin microtubule-based motor protein activities.motor protein (Kinesin-4)
21.1.1.4.4 Cell wall organisation.cellulose.cellulose synthase complex (CSC).microtubule-dependent CSC insertion.matrix polysaccharide-trafficking kinesin (FRA)