Gene: Sopen04g031390
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen04g031390
- Transcript Identifier Sopen04g031390.1
- Gene Type Coding gene
- Location Spenn-ch04 : 73124304-73126012 : negative
Gene Family Information
- ID HOM05D000612
- #Genes/#Species 928/98
- Phylogenetic origin
- ID ORTHO05D000461
- #Genes/#Species 906/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen04g031390.1
Descriptions
- Description WLIM1 | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: plasma membrane | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type | BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051017 | ISO | PLAZA Integrative Orthology | actin filament bundle assembly | AT1G10200 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051015 | ISO | PLAZA Integrative Orthology | actin filament binding | AT1G10200 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT1G10200 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015629 | ISO | PLAZA Integrative Orthology | actin cytoskeleton | AT1G10200 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G10200 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001781 | Zinc finger, LIM-type |
| Mapman id | Description |
|---|---|
| 15.5.39 | RNA biosynthesis.transcriptional regulation.transcription factor (LIM) |