Gene: Sopen04g030450
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen04g030450
- Transcript Identifier Sopen04g030450.1
- Gene Type Coding gene
- Location Spenn-ch04 : 72130419-72132556 : negative
Gene Family Information
- ID HOM05D002979
- #Genes/#Species 231/98
- Phylogenetic origin
- ID ORTHO05D003380
- #Genes/#Species 227/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sopen04g030450.1
Descriptions
- Description Tic20 is believed to function as a component of the protein-conducting channel at the inner envelope membrane. Genes AT1G04940 and AT1G04945 were switched for the TAIR7 genome release to give consistency with MIPs annotation. | translocon at the inner envelope membrane of chloroplasts 20 (TIC20) | CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein ycf60 , Chloroplast protein import component Tic20 | BEST Arabidopsis thaliana protein match is: HIT-type Zinc finger family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045037 | ISO | PLAZA Integrative Orthology | protein import into chloroplast stroma | AT1G04940 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G04940 |
| GO:0008320 | ISO | PLAZA Integrative Orthology | protein transmembrane transporter activity | AT1G04940 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009706 | ISO | PLAZA Integrative Orthology | chloroplast inner membrane | AT1G04940 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G03320 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT4G03320 |
| GO:0005622 | ISO | PLAZA Integrative Orthology | intracellular anatomical structure | AT1G04940 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005691 | Chloroplast protein import component Tic20 |
| Mapman id | Description |
|---|---|
| 23.1.3.1.1 | Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.component Tic20-I/IV |