Gene: Sopen04g030100

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g030100
  • Transcript Identifier Sopen04g030100.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 71727313-71734214 : negative

Gene Family Information

  • ID HOM05D002409
  • #Genes/#Species 281/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g030100.1

Descriptions

  • Description A member of MscS-like gene family, structurally very similar to MSL2, comprising of an N-terminal chloroplast transit peptide, five trans-membrane helices and a C-terminal cytoplasmic domain. Mutant plants showed abnormalities in the size and shape of plastids. MSL3-GFP was localized to discrete foci on the plastid envelope and co-localize with the plastid division protein AtMinE. MSL3 was capable of increasing the osmotic-shock survival of a mutant bacterial strain lacking MS-ion-channel activity. | MSCS-like 3 (MSL3) | FUNCTIONS IN: ion channel activity | INVOLVED IN: plastid organization, response to osmotic stress | LOCATED IN: membrane, plastid envelope | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Mechanosensitive ion channel MscS , Like-Sm ribonucleoprotein (LSM)-related domain | BEST Arabidopsis thaliana protein match is: MSCS-like 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055085
IEA
InterProtransmembrane transport
GO:0010020
ISO
PLAZA Integrative Orthologychloroplast fission AT1G58200
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress AT1G58200
GO:0009657
ISO
PLAZA Integrative Orthologyplastid organization AT1G58200

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005216
ISO
PLAZA Integrative Orthologyion channel activity AT1G58200

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
InterPromembrane
GO:0009526
ISO
PLAZA Integrative Orthologyplastid envelope AT1G58200

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006685 Mechanosensitive ion channel MscS
IPR023408 Mechanosensitive ion channel MscS domain superfamily
IPR045042 Mechanosensitive ion channel protein YnaI-like
IPR010920 LSM domain superfamily
Mapman id Description
24.3.5 Solute transport.channels.mechanosensitive ion channel (MSL)