Gene: Sopen04g029430

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g029430
  • Transcript Identifier Sopen04g029430.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 70980845-70982645 : positive

Gene Family Information

  • ID HOM05D002167
  • #Genes/#Species 309/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g029430.1

Descriptions

  • Description Ribosomal protein S5 family protein | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, membrane | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, eukaryotic/archaeal , Ribosomal protein S5, N-terminal , Double-stranded RNA-binding-like , Ribosomal protein S5, C-terminal , Ribosomal protein S5 domain 2-type fold , Ribosomal protein S5 , Ribosomal protein S5 domain 2-type fold, subgroup , Ribosomal protein S5, N-terminal, conserved site | BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003723
IEA
InterProRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G41840
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G58684

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
InterProribosome
GO:0015935
IEA
InterProsmall ribosomal subunit
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G58380
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT2G41840
GO:0022627
ISO
PLAZA Integrative Orthologycytosolic small ribosomal subunit AT1G58380
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT1G58983
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G41840
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G41840
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G58380
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT2G41840

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020568 Ribosomal protein S5 domain 2-type fold
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
IPR000851 Ribosomal protein S5
IPR005711 Ribosomal protein S5, eukaryotic/archaeal
IPR005324 Ribosomal protein S5, C-terminal
IPR013810 Ribosomal protein S5, N-terminal
Mapman id Description
17.1.3.1.2 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS2