Gene: Sopen04g028350
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen04g028350
- Transcript Identifier Sopen04g028350.1
- Gene Type Coding gene
- Location Spenn-ch04 : 69802929-69809256 : negative
Gene Family Information
- ID HOM05D001668
- #Genes/#Species 387/98
- Phylogenetic origin
- ID ORTHO05D001693
- #Genes/#Species 369/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen04g028350.1
Descriptions
- Description Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth. | sphingoid base hydroxylase 2 (SBH2) | CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase | BEST Arabidopsis thaliana protein match is: sphingoid base hydroxylase 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008610 | IEA | InterPro | lipid biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005506 | IEA | InterPro | iron ion binding | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006694 | Fatty acid hydroxylase |
| Mapman id | Description |
|---|---|
| 5.4.4 | Lipid metabolism.sphingolipid biosynthesis.sphingobase hydroxylase (SBH) |