Gene: Sopen03g040410
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g040410
- Transcript Identifier Sopen03g040410.1
- Gene Type Coding gene
- Location Spenn-ch03 : 74288194-74293004 : positive
Gene Family Information
- ID HOM05D000506
- #Genes/#Species 1057/98
- Phylogenetic origin
- ID ORTHO05D000369
- #Genes/#Species 1049/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen03g040410.1
Descriptions
- Description Originally identified as a mutation that causes floral organs to fuse together. About 10-20% of mutants also have defects in ovules. Mutants have reduced fertility most likely as because of fusions that pistil emergence. The protein has similarity to the mandelonitrile lyase family of FAD containing oxidoreductases and is predicted to be secreted (SignalP).It is expressed in all tissue layers of roots, inflorescences, stems, leaves, and flowers and is also expressed in siliques. Expression is highest in inflorescence and flower tissue.Transmission of mutant alleles to the progeny shows non mendelian segregation- a percentage of mutant alleles revert back to a previous parental (e.g. grandparental) wild type allele. It has been suggested that an RNA template driven or other extra-DNA genomic mechanism may be responsible for the non-mendelian inheritance of HTH. Reversion events in alleles at other loci have also been observed to occur in plants with an hth mutant background indicating a genome wide effect. | HOTHEAD (HTH) | CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal , Glucose-methanol-choline oxidoreductase , Glucose-methanol-choline oxidoreductase, C-terminal | BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007267 | ISO | PLAZA Integrative Orthology | cell-cell signaling | AT1G72970 |
| GO:0009553 | ISO | PLAZA Integrative Orthology | embryo sac development | AT1G72970 |
| GO:0010430 | ISO | PLAZA Integrative Orthology | fatty acid omega-oxidation | AT1G72970 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016614 | IEA | InterPro | oxidoreductase activity, acting on CH-OH group of donors | |
| GO:0050660 | IEA | InterPro | flavin adenine dinucleotide binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.9.1.4 | Cell wall organisation.cutin and suberin.cuticular lipid formation.omega-hydroxy fatty acyl dehydrogenase |