Gene: Sopen03g040350
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g040350
- Transcript Identifier Sopen03g040350.1
- Gene Type Coding gene
- Location Spenn-ch03 : 74235776-74241094 : positive
Gene Family Information
- ID HOM05D000140
- #Genes/#Species 2610/97
- Phylogenetic origin
- ID ORTHO05D000087
- #Genes/#Species 2327/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen03g040350.1
Descriptions
- Description beta-galactosidase, glycosyl hydrolase family 35 | beta galactosidase 1 (BGAL1) | FUNCTIONS IN: beta-galactosidase activity | INVOLVED IN: carbohydrate metabolic process | LOCATED IN: cell wall, plant-type cell wall | EXPRESSED IN: 27 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site , Glycoside hydrolase, family 35 , D-galactoside/L-rhamnose binding SUEL lectin , Glycoside hydrolase, catalytic core , Glycoside hydrolase, subgroup, catalytic core , Galactose-binding domain-like | BEST Arabidopsis thaliana protein match is: beta-galactosidase 3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030246 | IEA | InterPro | carbohydrate binding | |
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0004565 | ISO | PLAZA Integrative Orthology | beta-galactosidase activity | AT3G13750 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G13750 |
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT3G13750 |
| GO:0009505 | ISO | PLAZA Integrative Orthology | plant-type cell wall | AT3G13750 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000922 | D-galactoside/L-rhamnose binding SUEL lectin domain |
| IPR041392 | Beta-galactosidase, beta-sandwich domain |
| IPR001944 | Glycoside hydrolase, family 35 |
| IPR017853 | Glycoside hydrolase superfamily |
| IPR043159 | D-galactoside/L-rhamnose binding SUEL lectin domain superfamily |
| IPR031330 | Glycoside hydrolase 35, catalytic domain |
| IPR008979 | Galactose-binding-like domain superfamily |
| Mapman id | Description |
|---|---|
| 21.3.2.2.3 | Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase (BGAL) |