Gene: Sopen03g038880

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g038880
  • Transcript Identifier Sopen03g038880.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 73115522-73121394 : negative

Gene Family Information

  • ID HOM05D002499
  • #Genes/#Species 272/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g038880.1

Descriptions

  • Description BRAP2 RING ZnF UBP domain-containing protein 2 (BRIZ2) | FUNCTIONS IN: catalytic activity, zinc ion binding | LOCATED IN: chloroplast | EXPRESSED IN: 10 plant structures | EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: BRCA1-associated 2 , Zinc finger, UBP-type , Zinc finger, RING-type | BEST Arabidopsis thaliana protein match is: zinc finger (ubiquitin-hydrolase) domain-containing protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010029
ISO
PLAZA Integrative Orthologyregulation of seed germination AT2G26000
GO:0016567
ISO
PLAZA Homology (enrichment)protein ubiquitination HOM05D002499

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT2G26000
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G26000
GO:0043130
ISO
PLAZA Integrative Orthologyubiquitin binding AT2G26000
GO:0046982
ISO
PLAZA Integrative Orthologyprotein heterodimerization activity AT2G26000

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000151
ISO
PLAZA Integrative Orthologyubiquitin ligase complex AT2G26000

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001607 Zinc finger, UBP-type
IPR011422 BRCA1-associated 2
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.3.3.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ubiquitin protein ligase (BRIZ)