Gene: Sopen03g035340
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g035340
- Transcript Identifier Sopen03g035340.1
- Gene Type Coding gene
- Location Spenn-ch03 : 70309197-70319093 : positive
Gene Family Information
- ID HOM05D001174
- #Genes/#Species 529/100
- Phylogenetic origin
- ID ORTHO05D001003
- #Genes/#Species 522/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen03g035340.1
Descriptions
- Description encodes a PHD-domain containing protein required for male meiosis. Gene is expressed in developing male meiocytes and protein is localized to the nucleus. | MALE MEIOCYTE DEATH 1 (MMD1) | FUNCTIONS IN: DNA binding, zinc ion binding | INVOLVED IN: microsporogenesis, regulation of transcription, DNA-dependent, male meiosis | LOCATED IN: nucleus | EXPRESSED IN: sperm cell, flower | EXPRESSED DURING: petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site , Zinc finger, PHD-type , Zinc finger, FYVE/PHD-type , Zinc finger, PHD-finger | BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | InterPro | metal ion binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.29 | RNA biosynthesis.transcriptional regulation.transcription factor (PHD) |