Gene: Sopen03g029730
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g029730
- Transcript Identifier Sopen03g029730.1
- Gene Type Coding gene
- Location Spenn-ch03 : 65509069-65518209 : negative
Gene Family Information
- ID HOM05D000140
- #Genes/#Species 2610/97
- Phylogenetic origin
- ID ORTHO05D000087
- #Genes/#Species 2327/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen03g029730.1
Descriptions
- Description member of Glycoside Hydrolase Family 35 | beta-galactosidase 10 (BGAL10) | FUNCTIONS IN: cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity | INVOLVED IN: response to karrikin | LOCATED IN: cell wall, plant-type cell wall | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site , Glycoside hydrolase, family 35 , Glycoside hydrolase, catalytic core , Glycoside hydrolase, subgroup, catalytic core , Galactose-binding domain-like | BEST Arabidopsis thaliana protein match is: beta-galactosidase 8
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0080167 | ISO | PLAZA Integrative Orthology | response to karrikin | AT5G63810 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0030246 | IEA | InterPro | carbohydrate binding | |
| GO:0004565 | ISO | PLAZA Integrative Orthology | beta-galactosidase activity | AT5G63810 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR017853 | Glycoside hydrolase superfamily |
| IPR008979 | Galactose-binding-like domain superfamily |
| IPR031330 | Glycoside hydrolase 35, catalytic domain |
| IPR041392 | Beta-galactosidase, beta-sandwich domain |
| IPR043159 | D-galactoside/L-rhamnose binding SUEL lectin domain superfamily |
| IPR001944 | Glycoside hydrolase, family 35 |
| IPR000922 | D-galactoside/L-rhamnose binding SUEL lectin domain |
| Mapman id | Description |
|---|---|
| 21.2.1.2.4 | Cell wall organisation.hemicellulose.xyloglucan.modification and degradation.1,2-beta-galactosidase |