Gene: Sopen03g028980
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g028980
- Transcript Identifier Sopen03g028980.1
- Gene Type Coding gene
- Location Spenn-ch03 : 64773659-64776710 : positive
Gene Family Information
- ID HOM05D000119
- #Genes/#Species 2812/100
- Phylogenetic origin
- ID ORTHO05D000054
- #Genes/#Species 2725/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen03g028980.1
Descriptions
- Description putative transcription factor: R2R3-MYB transcription family | myb domain protein 52 (MYB52) | CONTAINS InterPro DOMAIN/s: SANT, DNA-binding , Homeodomain-like , Myb, DNA-binding , HTH transcriptional regulator, Myb-type, DNA-binding , Homeodomain-related , Myb transcription factor | BEST Arabidopsis thaliana protein match is: myb domain protein 54
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:1902074 | ISO | PLAZA Integrative Orthology | response to salt | AT1G17950 |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT1G17950 |
| GO:1901347 | ISO | PLAZA Integrative Orthology | negative regulation of secondary cell wall biogenesis | AT1G17950 |
| GO:0009834 | ISO | PLAZA Integrative Orthology | plant-type secondary cell wall biogenesis | AT1G17950 |
| GO:1901348 | ISO | PLAZA Integrative Orthology | positive regulation of secondary cell wall biogenesis | AT1G17950 |
| GO:2000652 | ISO | PLAZA Integrative Orthology | regulation of secondary cell wall biogenesis | AT1G73410 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT1G17950 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G73410 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT1G73410 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G73410 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.2.1 | RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB) |