Gene: Sopen03g028980

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g028980
  • Transcript Identifier Sopen03g028980.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 64773659-64776710 : positive

Gene Family Information

  • ID HOM05D000119
  • #Genes/#Species 2812/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g028980.1

Descriptions

  • Description putative transcription factor: R2R3-MYB transcription family | myb domain protein 52 (MYB52) | CONTAINS InterPro DOMAIN/s: SANT, DNA-binding , Homeodomain-like , Myb, DNA-binding , HTH transcriptional regulator, Myb-type, DNA-binding , Homeodomain-related , Myb transcription factor | BEST Arabidopsis thaliana protein match is: myb domain protein 54
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1902074
ISO
PLAZA Integrative Orthologyresponse to salt AT1G17950
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT1G17950
GO:1901347
ISO
PLAZA Integrative Orthologynegative regulation of secondary cell wall biogenesis AT1G17950
GO:0009834
ISO
PLAZA Integrative Orthologyplant-type secondary cell wall biogenesis AT1G17950
GO:1901348
ISO
PLAZA Integrative Orthologypositive regulation of secondary cell wall biogenesis AT1G17950
GO:2000652
ISO
PLAZA Integrative Orthologyregulation of secondary cell wall biogenesis AT1G73410
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT1G17950

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G73410
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G73410

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G73410

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001005 SANT/Myb domain
IPR009057 Homeobox-like domain superfamily
Mapman id Description
15.5.2.1 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)