Gene: Sopen03g027780
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g027780
- Transcript Identifier Sopen03g027780.1
- Gene Type Coding gene
- Location Spenn-ch03 : 63343253-63347766 : negative
Gene Family Information
- ID HOM05D000169
- #Genes/#Species 2209/100
- Phylogenetic origin
- ID ORTHO05D001214
- #Genes/#Species 456/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen03g027780.1
Descriptions
- Description 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) (Clone 4CL16) - Glycine max (Soybean), encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. mRNA levels are not induced in response to wounding or to fungal infection by P. parasitica. mRNA is expressed in flowers, to a lesser degree in mature leaves and siliques and marginally in seedling roots and bolting stems of mature plants. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, cinnamic acid and 5-OH-ferulic acid. At4CL3 was unable to use sinapic acid as substrate. | 4-coumarate:CoA ligase 3 (4CL3) | CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site , AMP-dependent synthetase/ligase | BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT1G65060 |
| GO:0009698 | ISO | PLAZA Integrative Orthology | phenylpropanoid metabolic process | AT1G65060 |
| GO:0009411 | ISO | PLAZA Integrative Orthology | response to UV | AT1G65060 |
| GO:0050832 | ISO | PLAZA Integrative Orthology | defense response to fungus | AT1G65060 |
| GO:0010584 | ISO | PLAZA Integrative Orthology | pollen exine formation | AT1G65060 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016207 | ISO | PLAZA Integrative Orthology | 4-coumarate-CoA ligase activity | AT1G65060 |
| GO:0106290 | ISO | PLAZA Integrative Orthology | trans-cinnamate-CoA ligase activity | Os02g0697400 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |