Gene: Sopen03g026460

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g026460
  • Transcript Identifier Sopen03g026460.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 60685451-60686459 : negative

Gene Family Information

  • ID HOM05D000095
  • #Genes/#Species 3348/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g026460.1

Descriptions

  • Description Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1 | as shown through yeast two-hybrid assay). | Duplicated homeodomain-like superfamily protein | CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ , SANT, eukarya , Myb-like DNA-binding domain, SHAQKYF class , SANT, DNA-binding , Myb, DNA-binding , Homeodomain-like , HTH transcriptional regulator, Myb-type, DNA-binding | BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009739
ISO
PLAZA Integrative Orthologyresponse to gibberellin AT3G11280
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT3G11280
GO:0009751
ISO
PLAZA Integrative Orthologyresponse to salicylic acid AT3G11280

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G11280

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G11280

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001005 SANT/Myb domain
IPR017930 Myb domain
IPR043363 Transcription factor DIVARICATA-like
IPR009057 Homeobox-like domain superfamily
IPR006447 Myb domain, plants
Mapman id Description
15.5.2.2 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB-related)