Gene: Sopen03g026460
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g026460
- Transcript Identifier Sopen03g026460.1
- Gene Type Coding gene
- Location Spenn-ch03 : 60685451-60686459 : negative
Gene Family Information
- ID HOM05D000095
- #Genes/#Species 3348/100
- Phylogenetic origin
- ID ORTHO05D000330
- #Genes/#Species 1099/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen03g026460.1
Descriptions
- Description Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1 | as shown through yeast two-hybrid assay). | Duplicated homeodomain-like superfamily protein | CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ , SANT, eukarya , Myb-like DNA-binding domain, SHAQKYF class , SANT, DNA-binding , Myb, DNA-binding , Homeodomain-like , HTH transcriptional regulator, Myb-type, DNA-binding | BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009739 | ISO | PLAZA Integrative Orthology | response to gibberellin | AT3G11280 |
GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT3G11280 |
GO:0009751 | ISO | PLAZA Integrative Orthology | response to salicylic acid | AT3G11280 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003677 | IEA | InterPro | DNA binding | |
GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT3G11280 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G11280 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
15.5.2.2 | RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB-related) |