Gene: Sopen03g024950

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g024950
  • Transcript Identifier Sopen03g024950.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 57858208-57869959 : negative

Gene Family Information

  • ID HOM05D001364
  • #Genes/#Species 458/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g024950.1

Descriptions

  • Description RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G51120
GO:0008143
ISO
PLAZA Integrative Orthologypoly(A) binding AT5G51120
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G51120

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT5G51120

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
16.3.1.1.2 RNA processing.RNA 3'-end processing.mRNA polyadenylation.poly(A) RNA polymerase activity.poly(A) RNA polymerase regulatory protein