Gene: Sopen03g024670

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g024670
  • Transcript Identifier Sopen03g024670.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 57490372-57490887 : negative

Gene Family Information

  • ID HOM05D000268
  • #Genes/#Species 1624/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g024670.1

Descriptions

  • Description Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. | SU(VAR)3-9 homolog 3 (SUVH3) | CONTAINS InterPro DOMAIN/s: SET domain , SRA-YDG , Pre-SET zinc-binding sub-group , Pre-SET domain , Post-SET domain | BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034968
ISO
PLAZA Homology (enrichment)histone lysine methylation HOM05D000268

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
ISO
PLAZA Homology (enrichment)zinc ion binding HOM05D000268
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D000268
GO:0018024
ISO
PLAZA Homology (enrichment)histone-lysine N-methyltransferase activity HOM05D000268

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Homology (enrichment)nucleus HOM05D000268

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003105 SRA-YDG
IPR015947 PUA-like superfamily
IPR036987 SRA-YDG superfamily
Mapman id Description
35.1 not assigned.annotated