Gene: Sopen03g022380
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g022380
- Transcript Identifier Sopen03g022380.1
- Gene Type Coding gene
- Location Spenn-ch03 : 53909737-53912852 : negative
Gene Family Information
- ID HOM05D000482
- #Genes/#Species 1101/97
- Phylogenetic origin
- ID ORTHO05D000349
- #Genes/#Species 1074/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen03g022380.1
Descriptions
- Description closest Arabidopsis homolog of Zea maize metal-phytosiderophore/metal-nicotianamine transporter ZmYS1 | YELLOW STRIPE like 2 (YSL2) | FUNCTIONS IN: oligopeptide transporter activity | INVOLVED IN: oligopeptide transport, response to zinc ion, response to iron ion | LOCATED IN: plasma membrane | EXPRESSED IN: 14 plant structures | EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily | BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003006 | ISO | PLAZA Integrative Orthology | developmental process involved in reproduction | AT5G53550 |
| GO:0010043 | ISO | PLAZA Integrative Orthology | response to zinc ion | AT5G24380 |
| GO:0006826 | ISO | PLAZA Integrative Orthology | iron ion transport | AT5G24380 |
| GO:0010039 | ISO | PLAZA Integrative Orthology | response to iron ion | AT5G24380 |
| GO:0048316 | ISO | PLAZA Integrative Orthology | seed development | AT5G53550 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0035673 | IEA | InterPro | oligopeptide transmembrane transporter activity | |
| GO:0051980 | ISO | PLAZA Integrative Orthology | iron-nicotianamine transmembrane transporter activity | AT5G53550 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G53550 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 24.2.10.1 | Solute transport.carrier-mediated transport.OPT family.iron chelator transporter (YSL) |
| 25.4.2.2.2 | Nutrient uptake.metal homeostasis.iron.chelation-based strategy uptake.ferric cation-chelator transporter (YSL) |