Gene: Sopen03g006890
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g006890
- Transcript Identifier Sopen03g006890.1
- Gene Type Coding gene
- Location Spenn-ch03 : 5856065-5857171 : positive
Gene Family Information
- ID HOM05D000183
- #Genes/#Species 2094/97
- Phylogenetic origin
- ID ORTHO05D000100
- #Genes/#Species 2114/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen03g006890.1
Descriptions
- Description Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. | homeobox protein 40 (HB40) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: response to auxin stimulus, regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: ovule, fruit, root, flower | CONTAINS InterPro DOMAIN/s: Homeobox, conserved site , Homeobox , Helix-turn-helix motif, lambda-like repressor , Homeodomain-like , Homeodomain-related | BEST Arabidopsis thaliana protein match is: homeobox protein 21
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | ISO | PLAZA Homology (enrichment) | regulation of transcription, DNA-templated | HOM05D000183 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0043565 | ISO | PLAZA Homology (enrichment) | sequence-specific DNA binding | HOM05D000183 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.3.1 | RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP I/II) |