Gene: Sopen03g004520
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g004520
- Transcript Identifier Sopen03g004520.1
- Gene Type Coding gene
- Location Spenn-ch03 : 3301183-3302811 : positive
Gene Family Information
- ID HOM05D000001
- #Genes/#Species 35287/100
- Phylogenetic origin
- ID ORTHO05D009335
- #Genes/#Species 104/84
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen03g004520.1
Descriptions
- Description Tetratricopeptide repeat (TPR)-like superfamily protein | INVOLVED IN: biological_process unknown | LOCATED IN: chloroplast | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008380 | ISO | PLAZA Integrative Orthology | RNA splicing | AT4G25270 |
| GO:0009451 | ISO | PLAZA Integrative Orthology | RNA modification | AT4G25270 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT4G25270 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.11.4.1.5 | RNA processing.organelle machinery.pre-mRNA splicing.plastidial RNA splicing.splicing factor (OTP70) |