Gene: Sopen03g003890
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g003890
- Transcript Identifier Sopen03g003890.1
- Gene Type Coding gene
- Location Spenn-ch03 : 2591210-2593692 : negative
Gene Family Information
- ID HOM05D000338
- #Genes/#Species 1387/98
- Phylogenetic origin
- ID ORTHO05D001259
- #Genes/#Species 445/91
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen03g003890.1
Descriptions
- Description Pectin lyase-like superfamily protein | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: carbohydrate metabolic process | LOCATED IN: cell wall | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Glycoside hydrolase, family 28 , Pectin lyase fold , Parallel beta-helix repeat | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004650 | IEA | InterPro | polygalacturonase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 50.3.2 | Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase |