Gene: Sopen02g037910

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g037910
  • Transcript Identifier Sopen02g037910.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 58673133-58676335 : positive

Gene Family Information

  • ID HOM05D000285
  • #Genes/#Species 1537/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g037910.1

Descriptions

  • Description RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048576
ISO
PLAZA Integrative Orthologypositive regulation of short-day photoperiodism, flowering AT5G40490
GO:0048578
ISO
PLAZA Integrative Orthologypositive regulation of long-day photoperiodism, flowering AT5G40490
GO:0006378
ISO
PLAZA Integrative OrthologymRNA polyadenylation AT5G40490

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0097157
ISO
PLAZA Integrative Orthologypre-mRNA intronic binding AT5G40490
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G40490
GO:0003730
ISO
PLAZA Integrative OrthologymRNA 3'-UTR binding AT5G40490

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G40490

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
Mapman id Description
35.1 not assigned.annotated