Gene: Sopen02g036420

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g036420
  • Transcript Identifier Sopen02g036420.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 57420250-57423876 : positive

Gene Family Information

  • ID HOM05D000029
  • #Genes/#Species 5404/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g036420.1

Descriptions

  • Description Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs. | BARELY ANY MERISTEM 1 (BAM1) | CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain , Leucine-rich repeat-containing N-terminal domain, type 2 , Leucine-rich repeat , Serine/threonine-protein kinase-like domain , Protein kinase-like domain , Serine/threonine-protein kinase, active site | BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein ., Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil), Serine-threonine/tyrosine-protein kinase catalytic domain
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006468
IEA
InterProprotein phosphorylation
GO:0010075
ISO
PLAZA Integrative Orthologyregulation of meristem growth AT5G65700
GO:0048653
ISO
PLAZA Integrative Orthologyanther development AT5G65700
GO:0010480
ISO
PLAZA Integrative Orthologymicrosporocyte differentiation AT5G65700
GO:0048229
ISO
PLAZA Integrative Orthologygametophyte development AT5G65700
GO:0048437
ISO
PLAZA Integrative Orthologyfloral organ development AT5G65700
GO:0009934
ISO
PLAZA Integrative Orthologyregulation of meristem structural organization AT5G65700

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004672
IEA
InterProprotein kinase activity
GO:0005524
IEA
InterProATP binding
GO:0005515
IEA
InterProprotein binding
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT5G65700
GO:0043621
ISO
PLAZA Integrative Orthologyprotein self-association AT5G65700
GO:0033612
ISO
PLAZA Integrative Orthologyreceptor serine/threonine kinase binding AT5G65700

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G65700

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000719 Protein kinase domain
IPR003591 Leucine-rich repeat, typical subtype
IPR032675 Leucine-rich repeat domain superfamily
IPR013210 Leucine-rich repeat-containing N-terminal, plant-type
IPR011009 Protein kinase-like domain superfamily
IPR001611 Leucine-rich repeat
Mapman id Description
18.4.1.11 Protein modification.phosphorylation.TKL protein kinase superfamily.protein kinase (LRR-XI)