Gene: Sopen02g032620

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g032620
  • Transcript Identifier Sopen02g032620.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 54334463-54338043 : positive

Gene Family Information

  • ID HOM05D000319
  • #Genes/#Species 1449/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g032620.1

Descriptions

  • Description Cullin, putative, similar to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens) | contains Pfam profile PF00888: Cullin family. Interacts with other components of E3 ligase complex suggesting it functions in RUB-modification. Forms complexes with BTB domain proteins forming a novel class of E3-based ubiquitin protein-ligase complexes. Mutant is early flowering and has a reduced sensitivity to far-red light. cul3a/cul3b homozygous/heterozygous plants are embryo lethal. | cullin 3 (CUL3) | CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding , Cullin homology , Cullin protein, neddylation domain , Cullin, N-terminal , Cullin repeat-like-containing domain | BEST Arabidopsis thaliana protein match is: cullin 3B
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031625
IEA
InterProubiquitin protein ligase binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036317 Cullin homology domain superfamily
IPR019559 Cullin protein, neddylation domain
IPR036390 Winged helix DNA-binding domain superfamily
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR016159 Cullin repeat-like-containing domain superfamily
IPR001373 Cullin, N-terminal
IPR045093 Cullin
IPR016158 Cullin homology domain
Mapman id Description
19.2.2.8.2.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ubiquitin ligase complexes.scaffold component CUL3