Gene: Sopen02g030300
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen02g030300
- Transcript Identifier Sopen02g030300.1
- Gene Type Coding gene
- Location Spenn-ch02 : 52446802-52448521 : positive
Gene Family Information
- ID HOM05D000183
- #Genes/#Species 2094/97
- Phylogenetic origin
- ID ORTHO05D000100
- #Genes/#Species 2114/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen02g030300.1
Descriptions
- Description Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. | homeobox protein 21 (HB21) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Homeobox, conserved site , Homeobox , Homeodomain-like , Helix-turn-helix motif, lambda-like repressor , Homeodomain-related | BEST Arabidopsis thaliana protein match is: homeobox protein 40
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT5G66700 |
GO:0006355 | ISO | PLAZA Homology (enrichment) | regulation of transcription, DNA-templated | HOM05D000183 |
GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | AT5G66700 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003677 | IEA | InterPro | DNA binding | |
GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT4G36740 |
GO:0043565 | ISO | PLAZA Homology (enrichment) | sequence-specific DNA binding | HOM05D000183 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
15.5.3.1 | RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP I/II) |