Gene: Sopen02g024510
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen02g024510
- Transcript Identifier Sopen02g024510.1
- Gene Type Coding gene
- Location Spenn-ch02 : 47809922-47811037 : positive
Gene Family Information
- ID HOM05D000215
- #Genes/#Species 1875/100
- Phylogenetic origin
- ID ORTHO05D007108
- #Genes/#Species 134/88
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen02g024510.1
Descriptions
- Description Encodes a U-box/ARM repeat protein required fore self-incompatibility. | plant U-box 8 (PUB8) | FUNCTIONS IN: ubiquitin-protein ligase activity, binding, zinc ion binding | INVOLVED IN: protein ubiquitination | LOCATED IN: ubiquitin ligase complex | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , U box domain , Armadillo-like helical , Armadillo , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: plant U-box 13
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016567 | IEA | InterPro | protein ubiquitination |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004842 | IEA | InterPro | ubiquitin-protein transferase activity | |
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D000215 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |