Gene: Sopen02g023060

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g023060
  • Transcript Identifier Sopen02g023060.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 46549759-46553530 : positive

Gene Family Information

  • ID HOM05D002576
  • #Genes/#Species 264/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g023060.1

Descriptions

  • Description Encodes a ribosomal RPL21M protein that is localized to the mitochondrion and is involved in karyogamy during female gametophyte development and fertilization. Mutants display defects in both male and female gametophyte development (i.e.collapsed pollen and female gametophytes with unfused central cells). | NUCLEAR FUSION DEFECTIVE 1 (NFD1) | FUNCTIONS IN: structural constituent of ribosome, RNA binding | INVOLVED IN: translation, karyogamy, embryo sac development, double fertilization forming a zygote and endosperm, pollen development | LOCATED IN: mitochondrion, ribosome | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L21, conserved site , Ribosomal protein L21 | BEST Arabidopsis thaliana protein match is: Ribosomal protein L21
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation
GO:0010197
ISO
PLAZA Integrative Orthologypolar nucleus fusion AT4G30930
GO:0009567
ISO
PLAZA Integrative Orthologydouble fertilization forming a zygote and endosperm AT4G30930
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT4G30930
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT4G30930
GO:0000741
ISO
PLAZA Integrative Orthologykaryogamy AT4G30930

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT4G30930

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
InterProribosome
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT4G30930

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR028909 Ribosomal protein L21-like
IPR036164 L21-like superfamily
IPR001787 Ribosomal protein L21
Mapman id Description
17.7.1.1.20 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL21