Gene: Sopen02g016610

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g016610
  • Transcript Identifier Sopen02g016610.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 40834941-40837251 : positive

Gene Family Information

  • ID HOM05D000635
  • #Genes/#Species 893/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g016610.1

Descriptions

  • Description 34 kDa outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) (POM 34) - Solanum tuberosum (Potato), Encodes a voltage-dependent anion channel . VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol. | voltage dependent anion channel 1 (VDAC1) | FUNCTIONS IN: voltage-gated anion channel activity | INVOLVED IN: response to bacterium, anion transport | LOCATED IN: in 7 components | EXPRESSED IN: 27 plant structures | EXPRESSED DURING: 17 growth stages | CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type | BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT5G15090
GO:0009060
ISO
PLAZA Integrative Orthologyaerobic respiration AT5G15090
GO:0010029
ISO
PLAZA Integrative Orthologyregulation of seed germination AT5G15090
GO:0009617
ISO
PLAZA Integrative Orthologyresponse to bacterium AT5G15090
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT5G15090
GO:0006820
ISO
PLAZA Integrative Orthologyanion transport Zm00001eb357390
GO:0098656
IEA
InterProanion transmembrane transport
GO:0055085
IEA
InterProtransmembrane transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G15090
GO:0008308
IEA
InterProvoltage-gated anion channel activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT5G15090
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G15090
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G15090
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G15090
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT5G15090
GO:0005741
IEA
InterPromitochondrial outer membrane
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT5G15090
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT5G15090
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G15090
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT5G15090
GO:0032592
ISO
PLAZA Integrative Orthologyintegral component of mitochondrial membrane Zm00001eb357390

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027246 Eukaryotic porin/Tom40
IPR001925 Porin, eukaryotic type
IPR023614 Porin domain superfamily
Mapman id Description
24.4.1 Solute transport.porins.voltage-gated anion channel (VDAC)