Gene: Sopen02g012810
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen02g012810
- Transcript Identifier Sopen02g012810.1
- Gene Type Coding gene
- Location Spenn-ch02 : 35932493-35934087 : positive
Gene Family Information
- ID HOM05D000242
- #Genes/#Species 1731/97
- Phylogenetic origin
- ID ORTHO05D000700
- #Genes/#Species 664/91
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen02g012810.1
Descriptions
- Description Endochitinase B precursor (EC 3.2.1.14) (CHN-B) - Nicotiana tabacum (Common tobacco), encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | basic chitinase (HCHIB) | FUNCTIONS IN: chitinase activity | INVOLVED IN: response to cadmium ion, defense response to fungus, jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway | LOCATED IN: plasma membrane, vacuole | EXPRESSED IN: 10 plant structures | EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site , Glycoside hydrolase, family 19 , Chitin-binding, type 1 , Glycoside hydrolase, family 19, catalytic | BEST Arabidopsis thaliana protein match is: Chitinase family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0006032 | IEA | InterPro | chitin catabolic process | |
| GO:0016998 | IEA | InterPro | cell wall macromolecule catabolic process | |
| GO:0002239 | ISO | PLAZA Integrative Orthology | response to oomycetes | AT1G02360 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004568 | IEA | InterPro | chitinase activity | |
| GO:0008061 | ISO | PLAZA Homology (enrichment) | chitin binding | HOM05D000242 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |