Gene: Sopen02g005460

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g005460
  • Transcript Identifier Sopen02g005460.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 15075293-15077297 : negative

Gene Family Information

  • ID HOM05D002348
  • #Genes/#Species 289/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g005460.1

Descriptions

  • Description Fe superoxide dismutase | Fe superoxide dismutase 3 (FSD3) | FUNCTIONS IN: superoxide dismutase activity | INVOLVED IN: removal of superoxide radicals | LOCATED IN: chloroplast, nucleoid | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal , Manganese/iron superoxide dismutase , Manganese/iron superoxide dismutase, C-terminal , Manganese/iron superoxide dismutase, binding site | BEST Arabidopsis thaliana protein match is: Fe superoxide dismutase 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006801
IEA
InterProsuperoxide metabolic process
GO:0019430
ISO
PLAZA Integrative Orthologyremoval of superoxide radicals AT5G23310

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004784
IEA
InterProsuperoxide dismutase activity
GO:0046872
IEA
InterPrometal ion binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G23310

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042646
ISO
PLAZA Integrative Orthologyplastid nucleoid AT5G23310
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G23310
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid AT5G23310
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT5G23310

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019832 Manganese/iron superoxide dismutase, C-terminal
IPR001189 Manganese/iron superoxide dismutase
IPR019831 Manganese/iron superoxide dismutase, N-terminal
IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily
IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily
Mapman id Description
10.2.1.1 Redox homeostasis.enzymatic reactive oxygen scavenging.superoxide dismutase activities.iron superoxide dismutase (FSD)
15.6.1.2.2.4 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essential co-factor components.component PAP4/FSD3