Gene: Sopen01g051380

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g051380
  • Transcript Identifier Sopen01g051380.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 107010699-107015360 : negative

Gene Family Information

  • ID HOM05D000324
  • #Genes/#Species 1429/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g051380.1

Descriptions

  • Description Encodes a long chain acyl-CoA synthetase that catalyzes the synthesis of omega-hydroxy fatty acyl-CoA intermediates in the pathway to cutin synthesis. Required for repression of lateral root formation. | long-chain acyl-CoA synthetase 2 (LACS2) | CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site , AMP-dependent synthetase/ligase | BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010143
ISO
PLAZA Integrative Orthologycutin biosynthetic process AT1G49430
GO:0006633
ISO
PLAZA Integrative Orthologyfatty acid biosynthetic process AT1G49430
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT1G49430
GO:0006631
ISO
PLAZA Integrative Orthologyfatty acid metabolic process AT1G49430
GO:0010311
ISO
PLAZA Integrative Orthologylateral root formation AT1G49430
GO:0010025
ISO
PLAZA Integrative Orthologywax biosynthetic process AT1G49430

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031957
ISO
PLAZA Integrative Orthologyvery long-chain fatty acid-CoA ligase activity AT1G49430
GO:0004467
ISO
PLAZA Integrative Orthologylong-chain fatty acid-CoA ligase activity AT1G49430

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G49430
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT1G49430

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000873 AMP-dependent synthetase/ligase
IPR042099 ANL, N-terminal domain
IPR025110 AMP-binding enzyme, C-terminal domain
Mapman id Description
50.6.2 Enzyme classification.EC_6 ligases.EC_6.2 ligase forming carbon-sulfur bond