Gene: Sopen01g047360

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g047360
  • Transcript Identifier Sopen01g047360.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 103794794-103796454 : negative

Gene Family Information

  • ID HOM05D000142
  • #Genes/#Species 2580/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g047360.1

Descriptions

  • Description Zinc finger-containing glycine-rich RNA-binding protein. Cold-inducible. Contributes to the enhancement of freezing tolerance. | ATRZ-1A | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait , Zinc finger, CCHC-type | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
InterProzinc ion binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001878 Zinc finger, CCHC-type
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
IPR036875 Zinc finger, CCHC-type superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
35.1 not assigned.annotated