Gene: Sopen01g046380
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen01g046380
- Transcript Identifier Sopen01g046380.1
- Gene Type Coding gene
- Location Spenn-ch01 : 103068041-103071180 : positive
Gene Family Information
- ID HOM05D002874
- #Genes/#Species 241/93
- Phylogenetic origin
- ID ORTHO05D003250
- #Genes/#Species 235/93
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sopen01g046380.1
Descriptions
- Description RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: response to chitin | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box protein with domain of unknown function (DUF 1232)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT4G33940 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0061630 | IEA | InterPro | ubiquitin protein ligase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |