Gene: Sopen01g043900

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g043900
  • Transcript Identifier Sopen01g043900.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 100898550-100901742 : negative

Gene Family Information

  • ID HOM05D001043
  • #Genes/#Species 582/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g043900.1

Descriptions

  • Description Calreticulin precursor - Nicotiana plumbaginifolia (Leadwort-leaved tobacco), Encodes one of three Arabidopsis calreticulins. | calreticulin 1b (CRT1b) | FUNCTIONS IN: unfolded protein binding, calcium ion binding | INVOLVED IN: response to oxidative stress, response to salt stress | LOCATED IN: mitochondrion, endoplasmic reticulum, vacuole | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P , Calreticulin/calnexin , Calreticulin/calnexin, conserved site , Calreticulin , Concanavalin A-like lectin/glucanase | BEST Arabidopsis thaliana protein match is: calreticulin 1a
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034976
ISO
PLAZA Integrative Orthologyresponse to endoplasmic reticulum stress AT1G09210
GO:0032469
ISO
PLAZA Integrative Orthologyendoplasmic reticulum calcium ion homeostasis Zm00001eb096980
GO:0051208
ISO
PLAZA Integrative Orthologysequestering of calcium ion Zm00001eb096980
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT1G09210
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G56340
GO:0007165
ISO
PLAZA Integrative Orthologysignal transduction Zm00001eb096980
GO:0055074
ISO
PLAZA Integrative Orthologycalcium ion homeostasis AT1G56340
GO:0006457
IEA
InterProprotein folding

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045735
ISO
PLAZA Integrative Orthologynutrient reservoir activity Zm00001eb096980
GO:0005509
IEA
InterProcalcium ion binding
GO:0005515
IEA
InterProprotein binding
GO:0051082
IEA
InterProunfolded protein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G09210
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma Zm00001eb096980
GO:0005788
ISO
PLAZA Integrative Orthologyendoplasmic reticulum lumen Os07g0246200
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT1G09210
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT1G56340
GO:0042735
ISO
PLAZA Integrative Orthologyprotein body Zm00001eb096980
GO:0005783
IEA
InterProendoplasmic reticulum

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001580 Calreticulin/calnexin
IPR009033 Calreticulin/calnexin, P domain superfamily
IPR009169 Calreticulin
IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
Mapman id Description
19.1.1.1.1.2 Protein homeostasis.protein quality control.ER Quality Control (ERQC) machinery.calnexin/calreticulin chaperone system.CNX-CRT cycle.lectin chaperone (CRT)