Gene: Sopen01g043290

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g043290
  • Transcript Identifier Sopen01g043290.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 100394497-100396100 : positive

Gene Family Information

  • ID HOM05D002697
  • #Genes/#Species 255/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g043290.1

Descriptions

  • Description Translationally-controlled tumor protein homolog (TCTP) (p23) - Solanum tuberosum (Potato), Encodes a protein homologous to translationally controlled tumor protein (TCTP) from Drosophila. In flies, TCTP functions guanine nucleotide exchange factor in the TOR signaling pathway. TCTP is expressed throughout the plant with highest levels seen in meristematic regions of the shoot and root. Loss of function alleles are not transmitted through the male gametophyte due to defects in pollen tube growth. Hypomorphs, generated through RNAi, are dwarf and have smaller cells. These plants also have defects in lateral and primary root growth as well as root hair growth. The phenotypes are similar to TOR mutants suggesting that TCTP functions in the is pathway in Arabidopsis as well. | translationally controlled tumor protein (TCTP) | INVOLVED IN: in 8 processes | LOCATED IN: in 6 components | EXPRESSED IN: 28 plant structures | EXPRESSED DURING: 17 growth stages | CONTAINS InterPro DOMAIN/s: Translationally controlled tumour protein , Mss4/translationally controlled tumour-associated TCTP , Translationally controlled tumour protein, conserved site , Mss4-like | BEST Arabidopsis thaliana protein match is: Methionine sulfoxide reductase (MSS4-like) family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009819
ISO
PLAZA Integrative Orthologydrought recovery AT3G16640
GO:0001558
ISO
PLAZA Integrative Orthologyregulation of cell growth AT3G16640
GO:0048527
ISO
PLAZA Integrative Orthologylateral root development AT3G16640
GO:0042127
ISO
PLAZA Integrative Orthologyregulation of cell population proliferation AT3G05540
GO:0007346
ISO
PLAZA Integrative Orthologyregulation of mitotic cell cycle AT3G16640
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT3G16640
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT3G16640
GO:0048768
ISO
PLAZA Integrative Orthologyroot hair cell tip growth AT3G16640
GO:0009860
ISO
PLAZA Integrative Orthologypollen tube growth AT3G16640
GO:0010252
ISO
PLAZA Integrative Orthologyauxin homeostasis AT3G16640
GO:0040014
ISO
PLAZA Integrative Orthologyregulation of multicellular organism growth AT3G16640
GO:0031117
ISO
PLAZA Integrative Orthologypositive regulation of microtubule depolymerization AT3G16640
GO:0032502
ISO
PLAZA Integrative Orthologydevelopmental process AT3G05540
GO:0051301
ISO
PLAZA Integrative Orthologycell division AT3G16640
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT3G16640
GO:0009791
ISO
PLAZA Integrative Orthologypost-embryonic development AT3G16640
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT3G16640
GO:0090333
ISO
PLAZA Integrative Orthologyregulation of stomatal closure AT3G16640

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019904
ISO
PLAZA Integrative Orthologyprotein domain specific binding AT3G16640
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G16640
GO:0008017
ISO
PLAZA Integrative Orthologymicrotubule binding AT3G16640

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090406
ISO
PLAZA Integrative Orthologypollen tube AT3G16640
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G16640
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G16640
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G16640
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT3G16640
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G16640
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G16640
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT3G16640
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT3G16640
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT3G16640

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011057 Mss4-like superfamily
IPR018105 Translationally controlled tumour protein
IPR011323 Mss4/translationally controlled tumour-associated TCTP
Mapman id Description
35.1 not assigned.annotated