Gene: Sopen01g042260

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g042260
  • Transcript Identifier Sopen01g042260.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 99569556-99570854 : positive

Gene Family Information

  • ID HOM05D000157
  • #Genes/#Species 2371/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g042260.1

Descriptions

  • Description Encodes a putative RING-H2 zinc finger protein ATL6 (ATL6). | ATL6 | FUNCTIONS IN: zinc ion binding | INVOLVED IN: response to chitin | LOCATED IN: plasma membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: carbon/nitrogen insensitive 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0098542
ISO
PLAZA Integrative Orthologydefense response to other organism AT3G05200
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT3G05200
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT3G05200
GO:0016567
ISO
PLAZA Integrative Orthologyprotein ubiquitination AT3G05200

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT3G05200

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G05200

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001841 Zinc finger, RING-type
Mapman id Description
19.2.2.1.4.3.3.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ATL-subclass ligase