Gene: Sopen01g037400

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g037400
  • Transcript Identifier Sopen01g037400.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 95473872-95478761 : negative

Gene Family Information

  • ID HOM05D000226
  • #Genes/#Species 1818/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g037400.1

Descriptions

  • Description Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development | ANTHOCYANINLESS 2 (ANL2) | FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity | INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Homeobox, conserved site , Homeobox , Homeodomain-like , Lipid-binding START , Homeodomain-related | BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA AT4G25530
GO:0048497
ISO
PLAZA Integrative Orthologymaintenance of floral organ identity AT3G61150
GO:0043481
ISO
PLAZA Integrative Orthologyanthocyanin accumulation in tissues in response to UV light AT4G00730
GO:0009909
ISO
PLAZA Integrative Orthologyregulation of flower development AT4G25530
GO:0009957
ISO
PLAZA Integrative Orthologyepidermal cell fate specification AT1G79840
GO:0006723
ISO
PLAZA Integrative Orthologycuticle hydrocarbon biosynthetic process AT4G00730
GO:0006349
ISO
PLAZA Integrative Orthologyregulation of gene expression by genetic imprinting AT4G25530
GO:0009827
ISO
PLAZA Integrative Orthologyplant-type cell wall modification AT4G00730
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT4G00730
GO:0009911
ISO
PLAZA Integrative Orthologypositive regulation of flower development AT4G25530
GO:0048765
ISO
PLAZA Integrative Orthologyroot hair cell differentiation AT4G00730
GO:0010062
ISO
PLAZA Integrative Orthologynegative regulation of trichoblast fate specification AT1G79840

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G07260
GO:0003677
IEA
InterProDNA binding
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT1G79840
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G61150
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT4G25530
GO:0008289
IEA
InterProlipid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G79840

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001356 Homeobox domain
IPR002913 START domain
IPR009057 Homeobox-like domain superfamily
IPR042160 Homeobox-leucine zipper protein GLABRA2/ANL2/PDF2/ATML1-like
Mapman id Description
15.5.3.3 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP IV)