Gene: Sopen01g031110
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen01g031110
- Transcript Identifier Sopen01g031110.1
- Gene Type Coding gene
- Location Spenn-ch01 : 88555874-88564476 : negative
Gene Family Information
- ID HOM05D000032
- #Genes/#Species 5307/100
- Phylogenetic origin
- ID ORTHO05D006970
- #Genes/#Species 136/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen01g031110.1
Descriptions
- Description P-loop containing nucleoside triphosphate hydrolases superfamily protein | FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif , DNA/RNA helicase, DEAD/DEAH box type, N-terminal , RNA helicase, ATP-dependent, DEAD-box, conserved site , DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain | BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016070 | ISO | PLAZA Integrative Orthology | RNA metabolic process | Solyc01g079330.3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0003724 | ISO | PLAZA Integrative Orthology | RNA helicase activity | Solyc01g079330.3 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |