Gene: Sopen01g030900

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g030900
  • Transcript Identifier Sopen01g030900.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 88337855-88341670 : positive

Gene Family Information

  • ID HOM05D000037
  • #Genes/#Species 5045/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g030900.1

Descriptions

  • Description Pectin lyase-like superfamily protein | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: carbohydrate metabolic process | EXPRESSED IN: stem, root, stamen, seed | EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Glycoside hydrolase, family 28 , Pectin lyase fold , Parallel beta-helix repeat | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004650
IEA
InterPropolygalacturonase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012334 Pectin lyase fold
IPR006626 Parallel beta-helix repeat
IPR000743 Glycoside hydrolase, family 28
IPR011050 Pectin lyase fold/virulence factor
Mapman id Description
50.3.2 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase