Gene: Sopen01g028080

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g028080
  • Transcript Identifier Sopen01g028080.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 84088292-84089194 : negative

Gene Family Information

  • ID HOM05D000157
  • #Genes/#Species 2371/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g028080.1

Descriptions

  • Description RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations. | TOXICOS EN LEVADURA 2 (ATL2) | FUNCTIONS IN: zinc ion binding | INVOLVED IN: response to chitin, defense response | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0065003
ISO
PLAZA Integrative Orthologyprotein-containing complex assembly AT3G62690
GO:0006952
ISO
PLAZA Integrative Orthologydefense response AT3G16720
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT3G16720

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001841 Zinc finger, RING-type
Mapman id Description
19.2.2.1.4.3.3.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ATL-subclass ligase