Gene: Sopen01g027910

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g027910
  • Transcript Identifier Sopen01g027910.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 83645069-83646870 : positive

Gene Family Information

  • ID HOM05D000066
  • #Genes/#Species 3967/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g027910.1

Descriptions

  • Description xyloglucan endotransglycosylase-related protein (XTR3) | xyloglucan endotransglucosylase/hydrolase 25 (XTH25) | FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity | INVOLVED IN: plant-type cell wall biogenesis | LOCATED IN: endomembrane system, cell wall, apoplast | EXPRESSED IN: 9 plant structures | EXPRESSED DURING: 8 growth stages | CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase , Xyloglucan endo-transglycosylase, C-terminal , Concanavalin A-like lectin/glucanase, subgroup , Concanavalin A-like lectin/glucanase , Glycoside hydrolase, family 16 , Glycoside hydrolase, family 16, active site | BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0006073
ISO
PLAZA Homology (enrichment)cellular glucan metabolic process HOM05D000066
GO:0010411
ISO
PLAZA Homology (enrichment)xyloglucan metabolic process HOM05D000066
GO:0042546
ISO
PLAZA Homology (enrichment)cell wall biogenesis HOM05D000066

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016762
ISO
PLAZA Homology (enrichment)xyloglucan:xyloglucosyl transferase activity HOM05D000066

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048046
ISO
PLAZA Homology (enrichment)apoplast HOM05D000066
GO:0005618
ISO
PLAZA Homology (enrichment)cell wall HOM05D000066

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000757 Glycoside hydrolase family 16
IPR044791 Beta-glucanase/XTH
IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
Mapman id Description
35.1 not assigned.annotated