Gene: Sopen01g026260

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g026260
  • Transcript Identifier Sopen01g026260.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 79809970-79850318 : negative

Gene Family Information

  • ID HOM05D002812
  • #Genes/#Species 246/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g026260.1

Descriptions

  • Description binding | FUNCTIONS IN: binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Armadillo-type fold , Protein of unknown function DUF625 | BEST Arabidopsis thaliana protein match is: unknown protein ., Domain of unknown function DUF625
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070918
ISO
PLAZA Integrative Orthologyproduction of small RNA involved in gene silencing by RNA AT3G06670

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004722
ISO
PLAZA Integrative Orthologyprotein serine/threonine phosphatase activity AT3G06670
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G06670
GO:0070878
ISO
PLAZA Integrative Orthologyprimary miRNA binding AT3G06670

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G06670
GO:0016604
ISO
PLAZA Integrative Orthologynuclear body AT3G06670
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G06670
GO:0030289
ISO
PLAZA Integrative Orthologyprotein phosphatase 4 complex AT3G06670

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011989 Armadillo-like helical
IPR006887 Domain of unknown function DUF625
IPR011993 PH-like domain superfamily
IPR016024 Armadillo-type fold
Mapman id Description
18.4.25.1.3.3 Protein modification.phosphorylation.protein serine/threonine phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP4-class phosphatase complex.regulatory component PP4R3