Gene: Sopen01g006710
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen01g006710
- Transcript Identifier Sopen01g006710.1
- Gene Type Coding gene
- Location Spenn-ch01 : 6742270-6746300 : positive
Gene Family Information
- ID HOM05D000114
- #Genes/#Species 2914/98
- Phylogenetic origin
- ID ORTHO05D000075
- #Genes/#Species 2458/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen01g006710.1
Descriptions
- Description member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. | expansin A15 (EXPA15) | INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening | LOCATED IN: endomembrane system, extracellular region | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal , Rare lipoprotein A , Pollen allergen/expansin, C-terminal , Barwin-related endoglucanase , Expansin , Expansin/Lol pI , Expansin 45, endoglucanase-like | BEST Arabidopsis thaliana protein match is: expansin A1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009664 | ISO | PLAZA Homology (enrichment) | plant-type cell wall organization | HOM05D000114 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005576 | ISO | PLAZA Homology (enrichment) | extracellular region | HOM05D000114 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.4.2.1 | Cell wall organisation.cell wall proteins.expansin activities.alpha-class expansin |