Gene: Sopen01g005390

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g005390
  • Transcript Identifier Sopen01g005390.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 4750442-4752223 : negative

Gene Family Information

  • ID HOM05D000010
  • #Genes/#Species 9383/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g005390.1

Descriptions

  • Description Encodes a NAC domain transcription factor that interacts with VND7 and negatively regulates xylem vessel formation. | NAC domain containing protein 83 (NAC083) | CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein | BEST Arabidopsis thaliana protein match is: NAC domain containing protein 41
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT5G13180
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT5G13180
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT5G13180
GO:0010150
ISO
PLAZA Integrative Orthologyleaf senescence AT5G13180
GO:0010089
ISO
PLAZA Integrative Orthologyxylem development AT5G13180

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT2G33480
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G13180
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G14000

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036093 NAC domain superfamily
IPR003441 NAC domain
Mapman id Description
15.5.17 RNA biosynthesis.transcriptional regulation.transcription factor (NAC)