Gene: Sopen01g004020

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g004020
  • Transcript Identifier Sopen01g004020.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 2867916-2870954 : negative

Gene Family Information

  • ID HOM05D000545
  • #Genes/#Species 1002/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g004020.1

Descriptions

  • Description Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues. | nuclear factor Y, subunit A1 (NF-YA1) | CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B , CCAAT-binding factor, conserved site | BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A9
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0010262
ISO
PLAZA Integrative Orthologysomatic embryogenesis AT3G20910
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT3G20910
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT3G20910
GO:0055046
ISO
PLAZA Integrative Orthologymicrogametogenesis AT3G20910
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT3G20910
GO:0048316
ISO
PLAZA Integrative Orthologyseed development AT3G20910

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G20910

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001289 Nuclear transcription factor Y subunit A
Mapman id Description
15.5.49.1 RNA biosynthesis.transcriptional regulation.NF-Y transcription factor complex.component NF-YA