Gene: Sopen01g001590

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g001590
  • Transcript Identifier Sopen01g001590.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 538847-543413 : positive

Gene Family Information

  • ID HOM05D001485
  • #Genes/#Species 428/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g001590.1

Descriptions

  • Description Isocitrate dehydrogenase (NADP) (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP( )-specific ICDH) (IDP) - Solanum tuberosum (Potato), Encodes a NADP -isocitrate dehydrogenase that is believed to function in the cytosol. It appears to contribute to NADPH production under oxidative stress, and thereby to participate in redox signalling linked to defense responses. | cytosolic NADP -dependent isocitrate dehydrogenase (cICDH) | FUNCTIONS IN: isocitrate dehydrogenase (NADP ) activity, copper ion binding | INVOLVED IN: in 7 processes | LOCATED IN: cytosol, apoplast, plasma membrane | EXPRESSED IN: 27 plant structures | EXPRESSED DURING: 17 growth stages | CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase , Isocitrate dehydrogenase NADP-dependent, eukaryotic , Isocitrate/isopropylmalate dehydrogenase, conserved site | BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006102
IEA
InterProisocitrate metabolic process
GO:0010043
ISO
PLAZA Integrative Orthologyresponse to zinc ion AT1G65930
GO:0006739
ISO
PLAZA Integrative OrthologyNADP metabolic process AT1G65930
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G65930
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT1G65930

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004450
IEA
InterProisocitrate dehydrogenase (NADP+) activity
GO:0016616
IEA
InterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G65930

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G65930
GO:0005777
ISO
PLAZA Integrative Orthologyperoxisome AT1G54340
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G65930
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT1G65930
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G65930
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G65930

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004790 Isocitrate dehydrogenase NADP-dependent
IPR024084 Isopropylmalate dehydrogenase-like domain
Mapman id Description
50.1.1 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor