Gene: Sopen00g003710
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen00g003710
- Transcript Identifier Sopen00g003710.1
- Gene Type Coding gene
- Location Spenn-ch00 : 9018624-9020039 : positive
Gene Family Information
- ID HOM05D000349
- #Genes/#Species 1356/100
- Phylogenetic origin
- ID ORTHO05D000620
- #Genes/#Species 732/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen00g003710.1
Descriptions
- Description Tubulin alpha-2 chain (Alpha-2 tubulin) - Zea mays (Maize), Encodes an alpha-tubulin isoform required for right handed helical growth. | TUA6 | FUNCTIONS IN: protein binding, structural constituent of cytoskeleton | INVOLVED IN: response to salt stress, microtubule cytoskeleton organization, cellular response to gravity | LOCATED IN: in 8 components | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 16 growth stages | CONTAINS InterPro DOMAIN/s: Alpha tubulin , Tubulin , Tubulin/FtsZ, GTPase domain , Tubulin/FtsZ, N-terminal , Tubulin/FtsZ, C-terminal , Tubulin, conserved site , Tubulin/FtsZ, 2-layer sandwich domain | BEST Arabidopsis thaliana protein match is: tubulin alpha-2 chain
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007017 | IEA | InterPro | microtubule-based process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005200 | IEA | InterPro | structural constituent of cytoskeleton | |
| GO:0005525 | IEA | InterPro | GTP binding | |
| GO:0003924 | IEA | InterPro | GTPase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005874 | IEA | InterPro | microtubule |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002452 | Alpha tubulin |
| IPR003008 | Tubulin/FtsZ, GTPase domain |
| IPR023123 | Tubulin, C-terminal |
| IPR018316 | Tubulin/FtsZ, 2-layer sandwich domain |
| IPR000217 | Tubulin |
| IPR036525 | Tubulin/FtsZ, GTPase domain superfamily |
| IPR037103 | Tubulin/FtsZ-like, C-terminal domain |
| IPR008280 | Tubulin/FtsZ, C-terminal |
| Mapman id | Description |
|---|---|
| 20.1.1.1 | Cytoskeleton organisation.microtubular network.alpha-beta-Tubulin heterodimer.component alpha-Tubulin |