Gene: Solyc12g096300.2
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc12g096300.2
- Transcript Identifier Solyc12g096300.2.1
- Gene Type Coding gene
- Location SL4.0ch12 : 64799705-64802154 : negative
Gene Family Information
- ID HOM05D001697
- #Genes/#Species 382/99
- Phylogenetic origin
- ID ORTHO05D001905
- #Genes/#Species 339/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc12g096300.2.1
- uniprot A0A3Q7JEJ5
- gene_id Solyc12g096300
Descriptions
- Description 40S ribosomal protein S6 (AHRD V3.3 *** Q3HVK4_SOLTU)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | IEA | GOA Database | translation | |
| GO:0006412 | IEA | InterPro | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003735 | IEA | GOA Database | structural constituent of ribosome | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT4G31700 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005840 | IEA | GOA Database | ribosome | |
| GO:0005840 | IEA | InterPro | ribosome | |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT4G31700 |
| GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | AT4G31700 |
| GO:0022627 | ISO | PLAZA Integrative Orthology | cytosolic small ribosomal subunit | AT4G31700 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G31700 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT4G31700 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT4G31700 |
| GO:0042788 | ISO | PLAZA Integrative Orthology | polysomal ribosome | AT4G31700 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.1.3.1.7 | Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS6 |